Closed allyhawkins closed 4 months ago
Rather than output the bulk data and metadata as individual files within the project directory, we want to output these files to a bulk folder. This means updating the publishDir statement to be "${params.results_dir}/${meta.project_id}/bulk" in the line below: https://github.com/AlexsLemonade/scpca-nf/blob/a9dc826b8576c48ca38c6ca137f9eeced29c3acc/modules/bulk-salmon.nf#L71.
bulk
publishDir
"${params.results_dir}/${meta.project_id}/bulk"
Closed by #767
allyhawkins
commented
4 months ago allyhawkins
commented
4 months ago
Rather than output the bulk data and metadata as individual files within the project directory, we want to output these files to a
bulkfolder. This means updating thepublishDirstatement to be"${params.results_dir}/${meta.project_id}/bulk"in the line below: https://github.com/AlexsLemonade/scpca-nf/blob/a9dc826b8576c48ca38c6ca137f9eeced29c3acc/modules/bulk-salmon.nf#L71.