Closed jashapiro closed 2 years ago
The genetic demultiplexing workflow currently implemented in https://github.com/AlexsLemonade/alsf-scpca/tree/main/workflows/genetic-demux should be integrated into the main scpca-nf workflow.
If possible, this may reuse the STAR index created for Cell Ranger, rather than requiring a separate addition to build-index.nf.
build-index.nf
Closed by #93.
allyhawkins
commented
2 years ago allyhawkins
commented
2 years ago
The genetic demultiplexing workflow currently implemented in https://github.com/AlexsLemonade/alsf-scpca/tree/main/workflows/genetic-demux should be integrated into the main scpca-nf workflow.
If possible, this may reuse the STAR index created for Cell Ranger, rather than requiring a separate addition to
build-index.nf.