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AlgebraicJulia / ASKEM-demos

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SBML Expressions #6

Open jpfairbanks opened 1 year ago

jpfairbanks commented 1 year ago

We need to have an ADT for deserializing SBML expressions into a julia type that we can use to generate julia functions for custom rate laws in the petri nets.

ChrisRackauckas commented 1 year ago

https://github.com/LCSB-BioCore/SBML.jl is a core that just reads it into a general Julia type, which is then used in https://github.com/SciML/SBMLToolkit.jl to build the equations. It's fairly battletested.