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AlgebraicJulia
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AlgebraicPetri.jl
Build Petri net models compositionally
https://algebraicjulia.github.io/AlgebraicPetri.jl/
MIT License
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Add generation of functions to pass to ODEProblem, SDEProblem, JumpProblem
#178
sdwfrost
opened
5 days ago
1
Is there a function already to generate Petri.Model from LabelledPetriNet?
#177
sdwfrost
closed
5 days ago
5
Incorrect generation of state names?
#176
sdwfrost
opened
1 month ago
0
Update Comparison tests to Catlab > v0.16.9
#175
lukem12345
opened
2 months ago
1
CompatHelper: bump compat for Catalyst in [weakdeps] to 14, (keep existing compat)
#174
algebraicjuliabot
opened
2 months ago
0
adding buildkite functionality
#173
quffaro
opened
3 months ago
0
CompatHelper: bump compat for ModelingToolkit in [weakdeps] to 9, (keep existing compat)
#172
algebraicjuliabot
closed
4 months ago
0
Documentation refactor
#171
slwu89
closed
5 months ago
2
Use color to distinguish morphisms of Petri nets
#170
slwu89
opened
6 months ago
2
Improvements to documentation
#169
slwu89
closed
6 months ago
1
suggestions for documentation improvement
#168
slwu89
closed
5 months ago
1
removed redundant ODEProblem overload
#167
olynch
opened
7 months ago
2
Core Files in docs build
#166
jpfairbanks
opened
7 months ago
3
DOC: add package extension documentation
#165
mehalter
closed
11 months ago
0
Allow Catlab v0.16 in compat
#164
epatters
closed
11 months ago
1
Fix various breaking changes in dependencies
#163
mehalter
closed
11 months ago
0
Precompilation warnings in package extensions
#162
epatters
opened
11 months ago
11
Gatlab Migration
#161
jpfairbanks
closed
11 months ago
4
Update enzyme_reactions.jl
#160
tienbien44
opened
1 year ago
0
Update enzyme_reactions.jl
#159
tienbien44
opened
1 year ago
0
Fix bad assumption in `oapply_typed`
#158
epatters
closed
1 year ago
3
docs: multi-strain disease example for doc pages
#157
p-stokes
closed
1 year ago
0
fix: uncomment tests now that Catlab v0.15.1 supports them again
#156
mehalter
closed
1 year ago
0
oapply_typed results in wrong wiring
#155
sdwfrost
closed
1 year ago
2
changed indexing in vectorfield
#154
hhhults
closed
1 year ago
3
CompatHelper: bump compat for Catlab to 0.15, (keep existing compat)
#153
github-actions[bot]
closed
1 year ago
0
Issues when running stratified model
#152
sdwfrost
opened
1 year ago
1
Update compat for new Catlab version
#151
mehalter
closed
1 year ago
0
Add OrdinaryDiffEq package extension
#150
mehalter
closed
1 year ago
0
docs: fix LabelledReactionNet docstring
#149
mehalter
closed
1 year ago
0
AlgebraicPetri v0.9
#148
mehalter
closed
1 year ago
0
refactor!: move to `to_graphviz` for visualization
#147
mehalter
closed
1 year ago
2
Migrate to Catlab v0.15
#146
mehalter
closed
1 year ago
0
cleanup!: drop support for julia <1.9 and remove requires
#145
mehalter
closed
1 year ago
0
CLEANUP: clean up tests
#144
mehalter
closed
1 year ago
0
Changed `prim_petri` to fix issue when type system has multiple states.
#143
p-stokes
closed
1 year ago
0
`prim_petri` of TypedPetri.jl not labeling types of states correctly
#142
p-stokes
closed
1 year ago
0
Use cascading delete provided by Catlab
#141
epatters
closed
1 year ago
1
Expands `mca` to take a vector of input acsets and to return the morphisms as well as the max subacset.
#140
p-stokes
closed
1 year ago
2
Slwu89/vfield expr
#139
slwu89
closed
1 year ago
1
Utilize PrecompileTools.jl for Caching
#138
mehalter
closed
1 year ago
1
`vectorfield_expr` only works with LabelledArrays
#137
mehalter
closed
1 year ago
6
Allow `vectorfield_expr` work with more types
#136
mehalter
closed
1 year ago
0
perf: use native package extensions in julia 1.9+
#135
mehalter
closed
1 year ago
0
refactor(docs): move examples to docs and clean up random environments
#134
mehalter
closed
1 year ago
0
Generalize `mca` to work for more than two input ACSets
#133
p-stokes
closed
1 year ago
1
Have `mca` find the morphisms and return the spans
#132
p-stokes
closed
1 year ago
1
Fix MCA recursion overflowing
#131
p-stokes
closed
1 year ago
0
CompatHelper: bump compat for StatsBase to 0.34, (keep existing compat)
#130
github-actions[bot]
closed
1 year ago
1
`one_removed_subobs` does not remove arcs from Petri net
#129
p-stokes
closed
1 year ago
0
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