Computation of PSI (percent spliced in)

AlgoLab / galig

A graph aligner

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Computation of PSI (percent spliced in) #20

Open soumitrakp opened 2 years ago

soumitrakp commented 2 years ago

I found that ASGAL generated only the number of supporting reads for each of the splicing events. Could you please let me know (with code if possible) how to compute PSI values of each of these events? Thank you,

ldenti commented 2 years ago

Following our mail exchange, please see the snake+psi branch (still a work-in-progress).