This updates the version pin of datastep to 0.0.1. Copying the comment from the code here:
# SPECIAL RELEASE OF DATASTEP TO RESOLVE MALFORMED MANIFEST
# https://github.com/AllenCellModeling/datastep/tree/special-release
#
# Fortunately we left the 0.0.* series of releases empty
# New datastep projects will by default use the 0.1.* series of releases
Files pushed to quilt on this version of datastep will be prefixed with a hash of their absolute path. See quilt3distribute for examples of this behavior.
This occurred because @jxchen01 had paths following the structure: unique_part/general_part.tiff, i.e. cell_id/seg.tiff instead of the other way around: general_part/unique_part.tiff, i.e. segs/cell_id.tiff.
(If the column name for this file in the manifest was "cell_segs", this would result in: cell_segs/seg.tiff for all files... All files in the manifest are reduced to a single reference which means nothing but a single file is uploaded.)
In the future, can all devs on this project please push a sample of their data to quilt prior to running the entire dataset AND it is preferred to have the unique part of a file in the file name.
This was a design decision made a long time ago to allow the removal of the prefix hash.
This updates the version pin of
datastepto0.0.1. Copying the comment from the code here:Files pushed to quilt on this version of
datastepwill be prefixed with a hash of their absolute path. Seequilt3distributefor examples of this behavior.This occurred because @jxchen01 had paths following the structure:
unique_part/general_part.tiff, i.e.cell_id/seg.tiffinstead of the other way around:general_part/unique_part.tiff, i.e.segs/cell_id.tiff.(If the column name for this file in the manifest was "cell_segs", this would result in:
cell_segs/seg.tifffor all files... All files in the manifest are reduced to a single reference which means nothing but a single file is uploaded.)In the future, can all devs on this project please push a sample of their data to quilt prior to running the entire dataset AND it is preferred to have the unique part of a file in the file name.
This was a design decision made a long time ago to allow the removal of the prefix hash.