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AllenCell / cvapipe

Cell Variance Analysis Pipeline
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Address ImagingMode column from external data source #5

Closed evamaxfield closed 4 years ago

evamaxfield commented 4 years ago

Description

A clear description of the bug

@vianamp needs the ImagingMode column for some of his downstream analysis we just aren't sure where he got that column from. Believed to be Nathalie or @aditnath.

Expected Result

What did you expect to happen instead?

ImagingMode is a column in the base dataset is optimal ImagingMode as a CSV or other external datasource being ingested by the dependent step is the other option.

evamaxfield commented 4 years ago

Ping @aditnath any update on this?

aditnath commented 4 years ago

ImagingMode has been added to the dataset!

evamaxfield commented 4 years ago

Resolving this as @jxchen01 @toloudis @donovanr @ritvikvasan upgrade lkaccess to 1.4.19.

pip install --upgrade lkaccess