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Description
A clear description of the bug
I am attempting to use the batch processing feature of the plugin after having already generated my workflow. I keep getting the error message that imagecodecs is required. I have installed and have tried uninstalling and reinstalling to see if it wasn't recognizing it or is outdated. Nothing I have attempted has been able to solve the issue.
I am getting 1 kb tiff files as outputs that are unable to be opened in fiji
Reproduction
Please list the exact steps we can take to reproduce this bug.
1) generate workflow via the workflow editor
2) save the workflow
3) populate the required fields
4)run batch
Environment
Operating system (ex. MacOS Big Sur): Windows 11
Python version (ex. 3.8): 3.9.7
napari version (ex. 0.4.1): 0.4.18
How did you install the napari viewer (as a bundled app or through command line with pip)?: command line
This text document allows the plugin developers to gather the information they need to understand and prioritize your bug report. Please write your responses in the space below each section (replace [your answer here] with your answer), then click the "Submit new issue" button when you are finished. You can preview the formatting of this document using the Preview tab above.
Description
A clear description of the bug I am attempting to use the batch processing feature of the plugin after having already generated my workflow. I keep getting the error message that imagecodecs is required. I have installed and have tried uninstalling and reinstalling to see if it wasn't recognizing it or is outdated. Nothing I have attempted has been able to solve the issue.
Error message
Expected Behavior
I am getting 1 kb tiff files as outputs that are unable to be opened in fiji
Reproduction
Please list the exact steps we can take to reproduce this bug. 1) generate workflow via the workflow editor 2) save the workflow 3) populate the required fields 4)run batch
Environment
pip)?: command line