AllenCellModeling brightfield2fish issues

AllenCellModeling / brightfield2fish

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Add upper bound to aicsimageio version pin

#48 evamaxfield closed 5 years ago
1
test for fish seg dataprovider

#47 donovanr closed 5 years ago
1
create splits & loaders for downsampled / 2D data

#46 donovanr opened 5 years ago
1
save split inds as json

#45 donovanr closed 5 years ago
2
sav split indices

#44 donovanr closed 5 years ago
0
merge CAAX predictions into multichannel tiffs

#43 donovanr opened 5 years ago
0
run on downsampled images

#42 donovanr opened 5 years ago
0
Run all other structures

#41 donovanr opened 5 years ago
0
fix tifffile._tifffile not found error

#40 donovanr closed 5 years ago
1
use fork of aicimageio that unpins from tifffile==0.15

#39 donovanr closed 5 years ago
0
test for im shape and csv processing

#38 donovanr closed 5 years ago
1
make real fake tiffs for fake czis

#37 donovanr closed 5 years ago
1
Feature/improve test cov

#36 donovanr closed 5 years ago
1
add getitem coverage to dset test

#35 donovanr closed 5 years ago
1
update run files

#34 donovanr closed 5 years ago
1
Feature/run fnet here

#33 donovanr closed 5 years ago
2
Feature/add split script

#32 donovanr closed 5 years ago
1
initial guess at codecov setup

#31 donovanr closed 5 years ago
1
configure codecov and add badge

#30 donovanr closed 5 years ago
1
Feature/downsample images

#29 donovanr closed 5 years ago
1
remove dummy examples

#28 donovanr closed 5 years ago
0
dataset and utils tests

#27 donovanr closed 5 years ago
0
add normalized images so dset can be tested

#26 donovanr closed 5 years ago
0
make travis and tox python versions match, consolidate lint env in tox

#25 donovanr closed 5 years ago
0
remove "example" files from cookiecutter

#24 donovanr closed 5 years ago
0
add useful tests

#23 donovanr closed 5 years ago
1
add black to travis

#22 donovanr closed 5 years ago
0
Admin/flake8 update

#21 donovanr closed 5 years ago
1
add black to travis test

#20 donovanr closed 5 years ago
1
update readme and contrib

#19 donovanr closed 5 years ago
1
migrate deps from conda to pip

#18 donovanr closed 5 years ago
0
fix readme and contributing to reflect new install proceedure

#17 donovanr closed 5 years ago
1
move flake8 precommit hook from generic repo to https://gitlab.com/pycqa/flake8

#16 donovanr closed 5 years ago
1
figure out why test and setup are keys in extra_requirements dict

#15 donovanr closed 5 years ago
1
add data splitting code from test_split_data.ipynb in cheks_b2f to repo

#14 donovanr closed 5 years ago
1
add downsample option to data provider

#13 donovanr closed 5 years ago
1
figure out issues with conda .environment vs reqs.txt vs setup.py

#12 donovanr closed 5 years ago
1
check .flake8 vs .cfg

#11 donovanr closed 5 years ago
1
Master update

#10 donovanr closed 5 years ago
0
Update travis config to include package name in flake8

#9 evamaxfield closed 5 years ago
0
Add flake8 to travis yml

#8 evamaxfield closed 5 years ago
0
add CAAX channel to dataset

#7 donovanr closed 5 years ago
0
configure travis

#6 donovanr closed 5 years ago
1
configure docs (even just empty ones)

#5 donovanr opened 5 years ago
0
add installation / usage instructions to readme

#4 donovanr closed 5 years ago
1
add fnet usage to this repo

#3 donovanr closed 5 years ago
1
integrate pytorch 1.0 net into this repo's dependencies

#2 donovanr closed 5 years ago
1
fix dataset to include caax channel

#1 donovanr closed 5 years ago
1