Results: Figure 2 - Githubissues

AllenCellModeling / pytorch_integrated_cell

Integrated Cell project implemented in pytorch

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Results: Figure 2 #63

Open donovanr opened 4 years ago

donovanr commented 4 years ago

Issue summary

Clean up figure and move to white-background cell images

Details

Get rid of the black boxes with white Xs; lack of data is better conveyed by a simple white space. The faint magenta cell membrane label on the black background is very, very hard to see; I recommend that (essentially all) images be presented on a white background instead, like in Fig. 1.

TODO

[x] code
[ ] figure

donovanr commented 4 years ago

got greg's image generation code hacked to use white backgrounds in the figure gen notebook.