Investigate sessions without optotagging table

AllenInstitute / AllenSDK

code for reading and processing Allen Institute for Brain Science data

https://allensdk.readthedocs.io/en/latest/

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Investigate sessions without optotagging table #2374

Closed aamster closed 2 years ago

aamster commented 2 years ago

6 of the release sessions didn't generate an optotagging table. These sessions are 1043752325 1044016459 1077897245 1084939136 1152632711 1152811536

All of these didn't run ECEPHYS_OPTOTAGGING_TABLE_QUEUE for some reason

Failed MULTI_STIMULUS_CURRENT_SOURCE_DENSITY_QUEUE 1043752325 1044016459 1077897245 1152632711

Just didn't run ECEPHYS_OPTOTAGGING_TABLE_QUEUE 1084939136 1152811536

Manually run ECEPHYS_OPTOTAGGING_TABLE_QUEUE for these sessions and see it if it succeeds

If not, investigate why

sgratiy commented 2 years ago

Manually ran ECEPHYS_OPTOTAGGING_TABLE_QUEUE. All 6 sessions succeeded though the queue. I did not investigate the reasons for MULTI_STIMULUS_CURRENT_SOURCE_DENSITY_QUEUE failures.

Note: The session 1084939136 fail in creating input jsons but for a different reason #2380 Error: expected exactly 1 well known file of type EyeTracking Ellipses for EcephysSession 1084939136, found none Backtrace: /local1/rbprojects/lims/app/strategies/behavior_ecephys_write_nwb_strategy.rb:68:in get_well_known_file_uniquely' /local1/rbprojects/lims/app/strategies/behavior_ecephys_write_nwb_strategy.rb:157:inget_json_data' /local1/rbprojects/lims/app/strategies/slurm_json_strategy.rb:83: