Adds script to run notebooks and catch any errors

[aamster]

2601

• Adds script to run notebooks and catch any errors
• This script is run as part of a new github actions workflow which is triggered when the target branch is "master". Example run: https://github.com/AllenInstitute/AllenSDK/actions/runs/3498866966/jobs/5859760665. Many notebooks are failing. Some won't run until we update data on S3. Created #2611 to fix the others.
• The notebooks parameterize the output_dir to manage files output by the notebook using a tag named "parameters". This is in the papermill (library used to run notebooks) docs. Before, these paths referenced internal paths or fake paths, and so the notebook wouldn't run.
• Comments out blocks of notebook that output excessive data (~1 TB) or take an excessive amount of time to run (~1 hr)
• Skips behavior_ophys_session notebook since it can only be run internally. Didn't want to add a 2.5 GB NWB file to the repo or change the notebook to use the cloud api.

[review-notebook-app[bot]]

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[aamster]

@mikejhuang thanks for feedback. I think I addressed all your feedback.

[aamster]

What if the output of the notebook changes without throwing errors? Is there a way to review it?

@mikejhuang the notebook changes are automatically committed, like in this commit . But we can review the auto commit.