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AllenInstitute / AllenSDK

code for reading and processing Allen Institute for Brain Science data
https://allensdk.readthedocs.io/en/latest/
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Improve denoiser/DeepInterpolation multiprocessing using TensorFlow #2622

Closed morriscb closed 1 year ago

morriscb commented 1 year ago

Denoiser currently uses python's multiprocessing which is likely leading to inefficiency in processing. Look into and implement TensorFlow build in multiprocessing to speed up both training/inference. This will be working off of Scott's branch: https://github.com/danielsf/deepinterpolation/tree/staging/cleaner/ophys_etl