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AllenInstitute / AllenSDK

code for reading and processing Allen Institute for Brain Science data
https://allensdk.readthedocs.io/en/latest/
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Add 'quality' column to VBN units metadata table #2696

Open corbennett opened 1 year ago

corbennett commented 1 year ago

Describe the use case that is addressed by this feature. There is a useful column ('quality') in the session units table that's missing from the cache project_metadata units.csv. This column describes whether a unit was classified as 'noise' or 'good' by our spike sorting pipeline, which is a fundamental designation that should be available in the metadata table.

Describe the solution you'd like Add the 'quality' column to the project_metadata units.csv

Do you want to work on this issue? I've already made a units.csv that includes the quality column. If this is helpful, I'm happy to share it.

morriscb commented 1 year ago

Thanks Corbett. If you can send us the units.csv that would be helpful.