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AllenInstitute / MOp_taxonomies_ontology

Central location for versioning and sharing of taxonomy files relevant for ontology development as part of cell type cards.
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CS201912131_117 (Exc L5-6 FEZF2 LPO) is under oligo-opc #17

Closed shawntanzk closed 2 years ago

shawntanzk commented 2 years ago

Currently CS201912131_117 (Exc L5-6 FEZF2 LPO) is under oligo-opc, it is also under (Mouse L5/6 NP)-like and (Mouse Non-IT projecting)-like and glutamatergic (these are correct I assume) Should this be removed from oligo-opc?

cell_set_preferred_alias cell_set_label cell_set_accession cell_set_aligned_alias cell_set_alias_assignee cell_set_alias_citation cell_set_structure cell_set_ontology_tag species modality taxonomy_id taxonomy_description child_cell_set_accessions cell_type_card original_label cell_set_color
Exc L5-6 FEZF2 LPO RNAseq 116 CS201912131_117   Nikolas Jorstad PMID:34616062 primary motor cortex UBERON:0001384 Human RNAseq CCN201912131 Human M1 transcriptomics taxonomy Cell Type Exc L5-6 FEZF2 LPO
Oligo-OPC RNAseq 116-120 CS201912131_147 Oligodendrocyte-OPC Nikolas Jorstad PMID:34616062 primary motor cortex UBERON:0001384 Human RNAseq CCN201912131 Human M1 transcriptomics taxonomy CS201912131_79|CS201912131_117|CS201912131_118|CS201912131_119|CS201912131_120 No   #598077
raymond-sanchez commented 2 years ago

I'll double check with Jeremy that there's not a good reason it's like this (I think he uploaded this file), but I'd say it's fine to remove RNAseq 116 from Oligo-OPC, yes. Guessing that's either an error or something leftover from an earlier version of the taxonomy