How do I download specific cell type gene expression data for WHB?

AllenInstitute / abc_atlas_access

Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas

https://alleninstitute.github.io/abc_atlas_access/

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How do I download specific cell type gene expression data for WHB? #58

Closed ayeTown closed 2 months ago

ayeTown commented 2 months ago

Thank you for this awesome tool! Is there a way to download a subset of the gene expression raw data? For example, looking at a specific cell type of interest such as Astrocytes. I saw that you have the capability to download a subset of genes, but I'd like to download the whole gene expression raw data for a given cell type. Thanks for your time/help.

morriscb commented 2 months ago

Answered on the Allen Community forum: https://community.brain-map.org/t/how-do-i-download-specific-cell-type-gene-expression-data-from-whb/3648. Closing here.