Updates several .py files in the data_access module:
from_lims
from_lims_utilities
utilities
Updates made were to allow workarounds for getting general info for experiments that do not have a container assigned to them.
an example of how the new workaround can be done is:
import pandas as pd
import from_lims_utilities as lims_utils
c_exp = 1345581430 # id with container
n_exp = 1343780655 # id with no container
missing_container = lims_utils.experiment_missing_container(n_exp)
if missing_container == False:
general_info = lims_utils.get_general_info_for_LIMS_imaging_id("ophys_experiment_id", n_exp)
else:
general_info = lims_utils.get_general_info_for_LIMS_imaging_id_no_container("ophys_experiment_id", c_exp)
general_info
or thefrom_lims.get_general_info_for_ophys_experiment_id function incorporates that exact logic and should now work with experiments that have containers or not.
Updates several .py files in the
data_accessmodule:Updates made were to allow workarounds for getting general info for experiments that do not have a container assigned to them.
an example of how the new workaround can be done is:
or the
from_lims.get_general_info_for_ophys_experiment_idfunction incorporates that exact logic and should now work with experiments that have containers or not.