As part of the effort to move ecephys code out of AllenSDK and into its own repo (as was done with ophys), we will move the copy utility over to ecephys_etl_pipelines.
Attempt to retain commit history. e.g. consider using tools such as 'git subtree' or 'git fast export'/'git fast import'.
This will require:
[ ] Move the code
[ ] Clean up the code where necessary
[ ] Determine if subprocessing rsync is necessary, or if it can e replaces with `shutil.copy)
As part of the effort to move ecephys code out of AllenSDK and into its own repo (as was done with ophys), we will move the copy utility over to
ecephys_etl_pipelines.Attempt to retain commit history. e.g. consider using tools such as 'git subtree' or 'git fast export'/'git fast import'.
This will require:
rsyncis necessary, or if it can e replaces with `shutil.copy)Validation criteria:
ECEPHYS_SESSION_UPLOAD_QUEUEusing the SingularityDockerStrategyCurrent location: https://github.com/AllenInstitute/AllenSDK/tree/master/allensdk/brain_observatory/ecephys/copy_utility