Closed wbwakeman closed 3 years ago
More details:
Simple fix would be to add new elif
clause to:
We may want to consider this an opportunity to move the whole align_timestamps
module over to the ecephys_etl_pipelines
repo though:
Validation:
ecephys_etl_pipelines
) Confirm that old Visual Coding Neuropixel sessions still run through this module without issuealign_timestamps
moduleEstimate of 1-2 if just putting in the fast fix. Estimate of 3-5 if moving the whole module over from AllenSDK + putting in fast fix
The get_barcode_line of the align_timestamps module searches for barcode in several variations of sync file line labels that have been encountered. There is a new variation used by Visual Behavior Neuropixels: ephys_barcode
As defined in the excel file linked in the "Sync: PCIe 6612 DAQ" section of this confluence page.
Need to enable processing using this new line label. (Add another
elif
?)Probably worth checking if there are other places in the code where the new line labels break old implementations.