AllenInstitute / ecephys_etl_pipelines

Pipelines and modules for processing extracellular electrophysiology data
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Create Visual Behavior Neuropixels metadata writer #33

Closed danielsf closed 2 years ago

danielsf commented 2 years ago

Once #32 is done, we should write a metadata writer module to produce the text file that will serve as the input for the informatics_data_release_tool. The equivalent for VBO is here

https://github.com/AllenInstitute/AllenSDK/blob/master/allensdk/brain_observatory/behavior/behavior_project_cache/external/behavior_project_metadata_writer.py

The tool needs to accept a published_at date and then write out all of the metadata and paths to the data that will be released.

Should try to factor out any common code from the VBO writer so that we don't have to duplicate anything unnecessarily.

Tasks

Validation

Should not be undertaken until after #32 (where metadata table schema is documented)