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AllenInstitute / ecephys_spike_sorting

Modules for processing extracellular electrophysiology data from Neuropixels probes
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Bump scipy from 1.4.1 to 1.10.0 #84

Closed dependabot[bot] closed 11 months ago

dependabot[bot] commented 11 months ago

Bumps scipy from 1.4.1 to 1.10.0.

Release notes

Sourced from scipy's releases.

SciPy 1.10.0 Release Notes

SciPy 1.10.0 is the culmination of 6 months of hard work. It contains many new features, numerous bug-fixes, improved test coverage and better documentation. There have been a number of deprecations and API changes in this release, which are documented below. All users are encouraged to upgrade to this release, as there are a large number of bug-fixes and optimizations. Before upgrading, we recommend that users check that their own code does not use deprecated SciPy functionality (to do so, run your code with python -Wd and check for DeprecationWarning s). Our development attention will now shift to bug-fix releases on the 1.10.x branch, and on adding new features on the main branch.

This release requires Python 3.8+ and NumPy 1.19.5 or greater.

For running on PyPy, PyPy3 6.0+ is required.

Highlights of this release

  • A new dedicated datasets submodule (scipy.datasets) has been added, and is now preferred over usage of scipy.misc for dataset retrieval.
  • A new scipy.interpolate.make_smoothing_spline function was added. This function constructs a smoothing cubic spline from noisy data, using the generalized cross-validation (GCV) criterion to find the tradeoff between smoothness and proximity to data points.
  • scipy.stats has three new distributions, two new hypothesis tests, three new sample statistics, a class for greater control over calculations involving covariance matrices, and many other enhancements.

New features

scipy.datasets introduction

  • A new dedicated datasets submodule has been added. The submodules is meant for datasets that are relevant to other SciPy submodules ands content (tutorials, examples, tests), as well as contain a curated set of datasets that are of wider interest. As of this release, all the datasets from scipy.misc have been added to scipy.datasets (and deprecated in scipy.misc).
  • The submodule is based on Pooch (a new optional dependency for SciPy), a Python package to simplify fetching data files. This move will, in a subsequent release, facilitate SciPy to trim down the sdist/wheel sizes, by decoupling the data files and moving them out of the SciPy repository, hosting them externally and

... (truncated)

Commits
  • dde5059 REL: 1.10.0 final [wheel build]
  • 7856f28 Merge pull request #17696 from tylerjereddy/treddy_110_final_prep
  • 205b624 DOC: add missing author
  • 1ab9f1b DOC: update 1.10.0 relnotes
  • ac2f45f MAINT: integrate._qmc_quad: mark as private with preceding underscore
  • 3e0ae1a REV: integrate.qmc_quad: delay release to SciPy 1.11.0
  • 34cdf05 MAINT: FFT pybind11 fixups
  • 843500a Merge pull request #17689 from mdhaber/gh17686
  • 089924b REL: integrate.qmc_quad: remove from release notes
  • 3e47110 REL: 1.10.0rc3 unreleased
  • Additional commits viewable in compare view


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dependabot[bot] commented 11 months ago

OK, I won't notify you again about this release, but will get in touch when a new version is available. If you'd rather skip all updates until the next major or minor version, let me know by commenting @dependabot ignore this major version or @dependabot ignore this minor version.

If you change your mind, just re-open this PR and I'll resolve any conflicts on it.