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AllenInstitute
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ipfx
computes intrinsic cell features from intracellular electrophysiology data
https://ipfx.readthedocs.io/en/latest/
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[note] [dev] Removal of set_container_sources() method in IPFX 2.0.0
#560
sheriferson
opened
8 months ago
0
Python 3.9/3.11 support, dropping Python 3.6 support, and moving to GitHub Actions
#559
sheriferson
closed
8 months ago
0
pip install ipfx fails on macOS with M1 arm64 cpu (apple silicon)
#558
cudmore
closed
9 months ago
1
can't install ipfx
#557
sayakaminegishi
closed
8 months ago
3
fixes error messages in _get_series
#556
MatthewAitken
closed
1 year ago
0
Fail using the create_ephys_data_set to open nwb file in the patch-seq ephys dataset.
#555
melancholy12
opened
1 year ago
3
bugfix / pause + burst detection
#554
mzabolocki
opened
1 year ago
0
detect pauses update
#553
mzabolocki
closed
1 year ago
1
Release 1.0.7
#552
MatthewAitken
closed
1 year ago
0
Bugfix/chirp sampling ISSUE 546
#551
MatthewAitken
closed
1 year ago
1
Can't pip install (dependency conflicts with AllenSDK?)
#550
tmchartrand
opened
1 year ago
2
Reconfigure spike time processing module creation to match NWB best practice
#549
tmchartrand
opened
1 year ago
0
Update asset metadata for older exported NWBs at DANDI
#548
tmchartrand
opened
1 year ago
0
Update metadata embedding code for cell IDs etc
#547
tmchartrand
opened
1 year ago
0
Bypass bessel filter for Chirp sweeps sampled at 12.5K
#546
ru57y34nn
opened
2 years ago
5
remove pandas dependency freeze
#545
tmchartrand
opened
2 years ago
0
script_utils.filter_results should not return None
#544
gouwens
opened
2 years ago
0
Discussion related to #542
#543
t-b
opened
2 years ago
4
Stop IPFX from caching its NWB Schemas when writing/modifying NWB files
#542
njmei
closed
2 years ago
0
Cell attached spontaneous firing feature extraction
#541
ru57y34nn
opened
2 years ago
6
Merging master back into dev after release 1.0.5
#540
MatthewAitken
closed
2 years ago
0
Release 1.0.5
#539
MatthewAitken
closed
2 years ago
0
GH #537 - Decode nwb_version if byte object
#538
ru57y34nn
closed
2 years ago
1
IVSCC pipeline sweep extraction crashing with TypeError at get_nwb_version()
#537
ru57y34nn
closed
1 year ago
2
Feature extraction code for analysis in Gouwens, Sorensen, et al. - Cell, 2020
#536
gonzalobenegas
closed
2 years ago
3
Adapt pipeline processing for cells with multiple autobias target voltages
#535
ru57y34nn
opened
2 years ago
0
Gh 533/bugfix/pre and post stimulus target voltage
#534
ru57y34nn
opened
2 years ago
1
Pre- and Post-stimulus baselines should be compared to target voltage
#533
ru57y34nn
opened
3 years ago
3
Merge master into dev
#532
MatthewAitken
closed
3 years ago
0
testing git-lfs
#531
MatthewAitken
closed
3 years ago
0
Bugfix/525 null duration
#530
MatthewAitken
closed
3 years ago
0
require stim offset to define epoch
#529
MatthewAitken
closed
3 years ago
0
Release 1.0.4 (#523)
#528
MatthewAitken
closed
3 years ago
0
fixes stimulus epoch check
#527
MatthewAitken
closed
3 years ago
0
require stim offset to define epoch
#526
tmchartrand
closed
3 years ago
0
null stimulus duration in QC passed sweeps
#525
tmchartrand
closed
2 years ago
7
Release 1.0.4 (#523)
#524
MatthewAitken
closed
3 years ago
0
Release 1.0.4
#523
MatthewAitken
closed
3 years ago
0
Fix duration rounding to address #521
#522
gouwens
closed
3 years ago
2
issue with run_feature_vector_extraction
#521
hongruhu
closed
3 years ago
13
Address nan issue by selecting recording epoch as default
#520
tmchartrand
closed
3 years ago
1
Address nan issue by trimming sweeps
#519
tmchartrand
closed
3 years ago
1
Read epochs info from nwb2 files
#518
sgratiy
opened
3 years ago
3
Triage ipfx issues
#517
wbwakeman
closed
3 years ago
1
Failed and dropped sweeps are being used in Feature Extraction
#516
ru57y34nn
closed
1 year ago
9
IndexError: Cannot find ('EXTPCllATT',)
#515
sgratiy
closed
3 years ago
1
Gh-513/check in-bath electrode resistance before extracting baseline electrode current
#514
ru57y34nn
closed
3 years ago
1
extract_electrde_0 should check pipette resistance before
#513
ru57y34nn
closed
3 years ago
2
nwb_to_pdf fails with MIES-generated NWB2 files
#512
tmchartrand
opened
3 years ago
0
GH #508 - Remove np.nan values from np.diff array
#511
ru57y34nn
closed
1 year ago
3
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