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AllenInstitute / openscope_databook

OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈
https://alleninstitute.github.io/openscope_databook
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Add env variable check to cebra nb and add higher order chapter to tests #297

Closed rcpeene closed 1 year ago

rcpeene commented 1 year ago

The higher-order chapter is currently not in the tests. We must add them. However, the CEBRA notebook takes an incredible amount of time. We should leverage an environment variable in the tests so CEBRA can skip long parts.

rcpeene commented 1 year ago

The gridsearch section of the notebook is skipped, but not with an environment variable. I tagged the relevant cells with a "skip-execution" tag which the pytest suite avoids.