Closed danielsf closed 2 years ago
Finished up the function after testing it against the test data provided by @danielsf. All data were found to produce identical results to the hacked version of suite2p, thus we are confident the code presented here is working as intended. Once this ticket is merged we can hook up the compute_reference
function into the registration pipeline.
Based on experimentation with Suite2P's reference image generation routine, we have found that Suite2P reference image generation can fail in the low SNR regime. Specifically, it fails by wrapping the field of view vertically or horizontally. This failure propagates to the motion corrected movie. It is our hope that creating a properly generated reference image will solve this problem.
Tasks
Validation