Method to apply custom metadata to data assets

[dyf]

User story

As a user, I want to run a method to easily update custom metadata.

Acceptance criteria

• [ ] When a user runs a method with arguments with a supplied set of data asset IDs, these assets will have modality, subject id, platform, collection date, institution, and data level filled out correctly.
• [ ] ~The values for these fields should come from the document db API.~
• [ ] There is an option to print out the changes to a log file (default to True)
• [ ] Appropriate docstrings and unit tests

Sprint Ready Checklist

• [ ] 1. Acceptance criteria defined
• [ ] 2. Team understands acceptance criteria
• [ ] 3. Team has defined solution / steps to satisfy acceptance criteria
• [ ] 4. Acceptance criteria is verifiable / testable
• [ ] 5. External / 3rd Party dependencies identified
• [ ] 6. Ticket is prioritized and sized

Notes

Add any helpful notes here.

[Sun-flow]

This functionality is being fulfilled in the repo: https://github.com/AllenNeuralDynamics/CustomMetadataTagger

A codeocean capsule exists that is fulfilling this request. How can I perform a review on this work @dyf @jtyoung84 ?

[jtyoung84]

@Sun-flow I think the plan was to put the core logic in this repository. We can add a method similar to the APIHandler update_tags function and import this library as a dependency in the CustomMetadataTagger capsule. By maintaining the core logic here, we can re-use the function in other capsules and pipelines that are adding CustomMetadata on created data assets. I can update the acceptance criteria to remove the mention of document db. The CustomMetadataTagger capsule can pull the information from the different places and use a method here to combine the information.

[jtyoung84]

Closing this out for now