Neural dataframes to PSTH

AllenNeuralDynamics / aind-dynamic-foraging-data-utils

Tools for the analysis of behavior and neural data from the dynamic foraging task

MIT License

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Neural dataframes to PSTH #3

Open alexpiet opened 9 months ago

alexpiet commented 9 months ago

Is your feature request related to a problem? Please describe. Would like a tool that grabs the neural signals (or really any continuous time variable, like pupil diameter, licking rate, etc) and generates trial by trial alignments

that is "pupil diameter in the 2 seconds after each go cue" would return a table that has each row as a trial, and a column that is the pupil diameter in the 2 seconds after the go cue on each trial

rachelstephlee commented 9 months ago

Would this also allow for interpolation?

alexpiet commented 9 months ago

Yes, I think we would want the solution of #8 to be the first step of this, and we should have the option to interpolate

rachelstephlee commented 9 months ago

Would you want them to be folded in the same function, or have two different functions then?

alexpiet commented 8 months ago

Probably in the same function, but im open to whatever makes the most sense