AllenNeuralDynamics / aind-ephys-pipeline

Code Ocean pipeline for ephys processing with Kilosort2.5
MIT License
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question about cloning the capsule #22

Closed magland closed 3 days ago

magland commented 2 weeks ago

Hi, I'd like to access the source code of the capsule. From the .nf file it seems to be at

https://\$GIT_ACCESS_TOKEN@\$GIT_HOST/capsule-0874799.git

How can I get that?

alejoe91 commented 2 weeks ago

Hi @magland

All capsules are linked in the readme and you can also find the individual capsule repos from the main_local.nf and main_slurm.nf

The main.nf is what we use internally through Code Ocean