Review DF/F of existing capsule for scientific validity

AllenNeuralDynamics / aind-fip-dff

This capsule takes an input raw NWB file of fiber data and creates processed DFF traces

MIT License

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Review DF/F of existing capsule for scientific validity #2

Open jeromelecoq opened 2 days ago

jeromelecoq commented 2 days ago

The goal of this work is to check quality of DFF processing and document scientific output.

jeromelecoq commented 2 days ago

We should bring Johannes into next fiber processing kanban meeting to discuss.

hagikent commented 1 day ago

To my understanding, the last iteration (March/April) was as follows: -Stefano + I identified that Johannes's preprocessing is very harshly subtracting slow baseline signal -the reason seemed to be that the simulation process included "blank" recording channel in its learning data. -Stefano suggested Johannes using only "real" data for setting up simulation. -not sure if any amendment has been done since then.