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AllenNeuralDynamics / aind-ophys-extraction-suite2p

Combines cellpose and suite2p to extract sources, i.e. ROIs and their traces.
MIT License
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control whether suite2p uses anatomical or activity-based mode #7

Open dyf opened 3 days ago

dyf commented 3 days ago

add a command line arg and app panel for controlling whether suite2p uses anatomical mode or activity mode.

j-friedrich commented 3 days ago

The command line arg is already there, it's --anatomical_only

dyf commented 3 days ago

Great, let's add an app panel param then.

arielleleon commented 3 days ago

Will do - wrapping up some other pipeline stuff and I will add this in