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AllenNeuralDynamics / exa-spim-control

Acquisition control for the exaSPIM microscope system
MIT License
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implement "sample-pose" type of axes conventions #5

Closed adamkglaser closed 1 year ago

adamkglaser commented 2 years ago

fold axes conventions into config, potentially elevate this to implementation and standardization between all spim systems

Poofjunior commented 2 years ago

We now have 

[sample_pose_kwds.axis_map]
x = '-y'
y = 'z'
z = 'x'

as a way of remapping the tiger box coordinate frame so that we can think about things in the sample frame.