Merges adjacent output sites with identical p & q values. This reduces
output file size and also can speed up the program when run with high
FDR threshold (most notable at --fdr_threshold 1.0). Does not seem to
provide a meaningful speedup at a threshold below ~0.5, based on very
limited testing.
I haven't yet tested this as part of the full hotspot2.sh pipeline, so don't merge yet or anything.
Merges adjacent output sites with identical p & q values. This reduces output file size and also can speed up the program when run with high FDR threshold (most notable at --fdr_threshold 1.0). Does not seem to provide a meaningful speedup at a threshold below ~0.5, based on very limited testing.
I haven't yet tested this as part of the full
hotspot2.shpipeline, so don't merge yet or anything.Addresses #17.