Open hainm opened 1 year ago
If I pick y
for the answer, I get another error
Checking NetCDF4/HDF5:
Checking HDF5: Checking for bundled HDF5: Should CPPTRAJ attempt to build its own hdf5? {y|n}: y
Downloading hdf5...
Warning: 'wget' not found. Trying curl.
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
Unpacking hdf5...
Error: Could not unpack hdf5-1_10_9.tar.gz
Error: Building HDF5 failed.
curl -O https://github.com/HDFGroup/hdf5/archive/refs/tags/hdf5-1_10_9.tar.gz
I don’t think above work correctly.
Checking HDF5: Checking for bundled HDF5: Should CPPTRAJ attempt to build its own hdf5? {y|n}: n
This is expected behavior. Since HDF5 is enabled by default, if you don't download and build it there is no HDF5, hence a failure. You need to explicitly disable it with -nohdf5
.
Error: Could not unpack hdf5-1_10_9.tar.gz
Ugh. This is because wget
follows redirects by default and curl
does not. I need to add the -L
flag to the curl
command.
This is expected behavior. Since HDF5 is enabled by default, if you don't download and build it there is no HDF5, hence a failure. You need to explicitly disable it with
-nohdf5
.
Thanks. IMO, the error message should be clearer. (e.g: user say "no build" but cpptraj says "build failure").
I need to add the
-L
flag to thecurl
command.
yeah, this helps. Thanks.
@hainm I forgot to mention that I changed some of the error messages in #1019 - let me know if they are clearer now.
Yes, much clearer. Thanks.
On Tue, Mar 14, 2023 at 3:37 PM Daniel R. Roe @.***> wrote:
@hainm https://github.com/hainm I forgot to mention that I changed some of the error messages in #1019 https://github.com/Amber-MD/cpptraj/pull/1019 - let me know if they are clearer now.
— Reply to this email directly, view it on GitHub https://github.com/Amber-MD/cpptraj/issues/1020#issuecomment-1468712521, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABB645MQROBPRZIWCVHKM63W4DCHBANCNFSM6AAAAAAVWTISSE . You are receiving this because you were mentioned.Message ID: @.***>
Hi
I am trying with
bash configure -shared -macAccelerate -noarpack -nosanderlib clang
Then I picked
n
for the answer but getting error:I think the error is misleading since I picked a
No
answer.