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AmpliconSuite / AmpliconSuite-pipeline

A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior to running AmpliconArchitect. Previously called PrepareAA.
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add samtools_path #38

Closed solo7773 closed 1 year ago

solo7773 commented 1 year ago

Add custom samtools and pass test from --fastqs to --run_AA in CentOS 7 PBS computation cluster.