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Amshaker / unetr_plus_plus

[IEEE TMI-2024] UNETR++: Delving into Efficient and Accurate 3D Medical Image Segmentation
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runtime error #15

Closed chuanqiWen closed 1 year ago

chuanqiWen commented 1 year ago

Traceback (most recent call last): File "unetr_pp/run/run_training.py", line 173, in main() File "unetr_pp/run/run_training.py", line 119, in main task = convert_id_to_task_name(task_id) File "/home/dl207/paper_experiment/unetr_plus_plus/unetr_pp/utilities/task_name_id_conversion.py", line 51, in convert_id_to_task_name raise RuntimeError("Could not find a task with the ID %d. Make sure the requested task ID exists and that " RuntimeError: Could not find a task with the ID 2. Make sure the requested task ID exists and that nnU-Net knows where raw and preprocessed data are located (see Documentation - Installation). Here are your currently defined folders: unetr_pp_preprocessed=DATASET/unetr_pp_raw/unetr_pp_raw_data/Task02_Synapse RESULTS_FOLDER=output_synapse unetr_pp_raw_data_base=DATASET/unetr_pp_raw If something is not right, adapt your environemnt variables.

Amshaker commented 1 year ago

Hi, You should download the provided pre-processed dataset and follow the data structure explained in the README file.