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AnIML Technique Definitions
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Chromatogram documentation is missing the actual data #16

Closed Mailaender closed 2 years ago

Mailaender commented 2 years ago

https://apps.bssn-software.de/techniquedocs/out/chromatography/ is comprehensive. However, I am missing storage fields for retention time, intensity/abundance and ions consisting of mass and abundance for mass spectrometry coupled with chromatography. Take a look at the standards defined by @HUPO-PSI who solved this some time ago.

burkhardschaefer commented 2 years ago

The chromatography technique only describes the separation, not the detection. Detectors have their own technique definitions.

For example, mass spec chromatograms (TICs, XICs, BPCs, etc.) are covered in ms-trace.atdd.

Mailaender commented 2 years ago

https://apps.bssn-software.de/techniquedocs/out/fid-trace/ works but https://apps.bssn-software.de/techniquedocs/out/ms-trace is not available. :(

Mailaender commented 2 years ago

Reading https://github.com/AnIML/techniques/blob/master/ms-trace.atdd is actually easier than the compiled HTML.