AnantLabs / xerial

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Silk parser fails to read a line containing various symbols #75

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago
What steps will reproduce the problem?
1. read the following silk data using Lens
  -qual: ====FFFFFF=@EEHHIIIIIIIHHHHIHIII@@@@FFFFGGFC::::ED=BBBBBDD6338<BB=::336::BA8888999-,,,,

2. causes org.xerial.core.XerialException: [INHERITED] 
org.xerial.core.XerialError: [INVALID_TOKEN] line=1(9): 
FailedPredicateException(BlankLine,{ isHead() }?)
    at org.xerial.core.XerialException.convert(XerialException.java:58)
    at org.xerial.lens.ObjectMapper$MappingProcess.execute(ObjectMapper.java:463)
    at org.xerial.lens.ObjectMapper.find(ObjectMapper.java:106)
    at org.xerial.lens.Lens.find(Lens.java:324)

What is the expected output? What do you see instead?

What version of the product are you using? On what operating system?

Please provide any additional information below.

Original issue reported on code.google.com by dha...@gmail.com on 8 Jul 2010 at 5:33

GoogleCodeExporter commented 9 years ago

Original comment by taroleo on 8 Jul 2010 at 5:38

GoogleCodeExporter commented 9 years ago
This issue was closed by revision ef76d3691f.

Original comment by taroleo on 8 Jul 2010 at 6:00