input file if relative path seems don't work well

AnantharamanLab / vRhyme

Binning Virus Genomes from Metagenomes

GNU General Public License v3.0

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input file if relative path seems don't work well #6

Open zpinocchio opened 2 years ago

zpinocchio commented 2 years ago

Thanks for your work! I use this commond vRhyme -i ../candidate_contig.fa -c depth_filter.vRhyme.txt and then, console log mkdir: cannot create directory ‘vRhyme_results_../candidate_contig/ FileNotFoundError: [Errno 2] No such file or directory vRhyme/vRhyme_results_../candidate_contig/log_vRhyme_candidate_contig.log'

It seems a little bug

KrisKieft commented 2 years ago

This should now be resolved, thank you. Rather than push a new update I modified the current version. Please re-install v1.1.0 to push the update. For a quick fix, at minimum the only file that needs to be replaced is vRhyme (within the vRhyme directory).

Kris