AnatomicMaps / flatmap-maker

Make anatomical flatmaps from SVG diagrams, Powerpoint slides, and other sources.
Apache License 2.0
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generation of path aacar-1 with the removal of multiple containers #22

Open keeran97 opened 1 year ago

keeran97 commented 1 year ago

The ardell path 1 seems to generate incorrectly with the removal of unnecessary containers. The change is code in the properties.json was:

from

{ "id": "n_69", "connects": [ "brain_13-1", "brain_14-1" ], "contained-in": [ "brain_26-1", "brain_25-1" ] },

to

{ "id": "n_69", "connects": [ "brain_13-1", "brain_14-1" ] },

Attached is the resulting change in the generation of the path. Seems that without these containers, the path generates to the pons in the rat body below, as opposed to the pons in the brain and spinal cord layout above. After some trial and error (i.e. seeing if brain_25-1 or brain_26-1 is the key), seems both are needed to generate the path properly.

So far, that is the only path I have noticed that generates differently with this change. multiple_containers_removed with_multiple_containers