AnatomicMaps / map-knowledge

Flatmap SCKAN knowledge store
Apache License 2.0
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Using sckan release on github as a data source using neurondm #23

Closed napakalas closed 7 months ago

napakalas commented 7 months ago

This PR

Results example:

ilxtr:sparc-nlp/mmset1/3a:

{'axons': [('UBERON:0001607', ())], 'connectivity': [(('UBERON:0002024', ()), ('UBERON:0011194', ())), (('UBERON:0022302', ()), ('UBERON:0001607', ())), (('UBERON:0001989', ()), ('UBERON:0002024', ())), (('UBERON:0011194', ()), ('UBERON:0022302', ()))], 'dendrites': [('UBERON:0001989', ())], 'id': 'ilxtr:sparc-nlp/mmset1/3a', 'label': 'Superior cervical ganglion to sphincter pupillae via internal ' 'carotid plexus via ophthalmic plexus via short ciliary nerve', 'long-label': 'Superior cervical ganglion to sphincter pupillae via internal ' 'carotid plexus via ophthalmic plexus via short ciliary nerve', 'phenotypes': ['ilxtr:neuron-phenotype-sym-post'], 'taxon': ['NCBITaxon:40674']}