AndersenLab / annotation-nf

Annotate VCF with snpeff and bcsq
1 stars 1 forks source link

Optional Snpeff + Config execution updates #9

Closed mckeowr1 closed 1 year ago

mckeowr1 commented 1 year ago

Add code to make SNPeff optional, the full run can take ~24 hours for CB. There were some changes to the resource utilization to optimize for quest. PATHS TO GFFS ARE HARD CODED - Will fix in subsequent pull req