Error in plot_genes process, using remote VCF

AndersenLab / cegwas2-nf

GWA mapping with C. elegans

MIT License

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Error in plot_genes process, using remote VCF #10

Closed faithman closed 5 years ago

faithman commented 5 years ago

Hi Stefan,

Thanks for your useful pipeline. I got an error in plot_genes process. It said Using remote VCF, not using the vcf I specified in my running command. Which raised the issue Error: Specified samples are not in the VCF. Is there a way to set to use my vcf in this process?

Thanks, Ye

Thatguy027 commented 5 years ago

fixed this in - commit c4b19a4eb267965b9655795093d32c92bef0140a on development branch

will put to master at some point

Thatguy027 commented 5 years ago

merged commit into master