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AndreaDesan / pimpleTKEBudgetFoam

OpenFOAM solver to calculate the resolved Reynolds stress, turbulent kinetic energy and dissipation rate at runtime in LES
GNU General Public License v3.0
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The issues in OpenFOAM v1906 #2

Open gangw0632 opened 3 years ago

gangw0632 commented 3 years ago

Hi! I'd like to know could this useful solver run on OpenFOAM v1906? But I've compiled successfully, but it directly crash the case after the 1st step..

AndreaDesan commented 3 years ago

Hi, not sure as I have not tested it with that OpenFOAM version - in fact I have only tested it using OpenFOAM Foundation's releases. What's the error message that you get? Andrea

gangw0632 commented 3 years ago

Hi! Thanks for your reply! The errors are like this, I'm running on a supercomputer in China:

[6] #0 Foam::error::printStack(Foam::Ostream&)[126] #0 Foam::error::printStack(Foam::Ostream&)[135] #0 Foam::error::printStack(Foam::Ostream&)[13] #0 Foam::error::printStack(Foam::Ostream&)[4] #0 Fo am::error::printStack(Foam::Ostream&)[5] #0 Foam::error::printStack(Foam::Ostream&)[55] #0 Foam::error::printStack(Foam::Ostream&)[182] #0 Foam::error::printStack(Foam::Ostream&)[103] #0 Foam::error: :printStack(Foam::Ostream&)[20] #0 Foam::error::printStack(Foam::Ostream&)[63] #0 Foam::error::printStack(Foam::Ostream&)[189] #0 Foam::error::printStack(Foam::Ostream&)[119] #0 Foam::error::printSta ck(Foam::Ostream&)[69] #0 Foam::error::printStack(Foam::Ostream&)[132] #0 Foam::error::printStack(Foam::Ostream&)[191] #0 Foam::error::printStack(Foam::Ostream&)[70] #0 [124] #0 Foam::error::printSt ack(Foam::Ostream&)[149] #0 Foam::error::printStack(Foam::Ostream&)[71] #0 Foam::error::printStack(Foam::Ostream&)[125] #0 Foam::error::printStack(Foam::Ostream&)[157] #0 Foam::error::printStack(Foam ::Ostream&)[21] #0 Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)[140] #0 Foam::error::printStack(Foam::Ostream&)[158] #0 Foam::error::printStack(Foam::Ostream&)[68] #0 Foam::error::printStack(Foam::Ostream&)[141] #0 Foam::error::printStack(Foam::Ostream&)[165] #0 Foam::error::printStack(Foam::Ostream&)[52] #0 [188] #0 Foam::error::printStack(Foam::Ostream&)Foam:: error::printStack(Foam::Ostream&)[60] #0 Foam::error::printStack(Foam::Ostream&)[172] #0 Foam::error::printStack(Foam::Ostream&)#0 Foam::error::printStack(Foam::Ostream&)[98] #0 Foam::error::printSta ck(Foam::Ostream&)[100] #0 Foam::error::printStack(Foam::Ostream&)[116] #0 Foam::error::printStack(Foam::Ostream&)[108] #0 Foam::error::printStack(Foam::Ostream&)[11] #0 Foam::error::printStack(Foam: :Ostream&)[28] #0 Foam::error::printStack(Foam::Ostream&)[156] #0 Foam::error::printStack(Foam::Ostream&)[90] #0 Foam::error::printStack(Foam::Ostream&)[99] #0 Foam::error::printStack(Foam::Ostream&) [31] #0 Foam::error::printStack(Foam::Ostream&)[162] #0 Foam::error::printStack(Foam::Ostream&)[107] #0 [79] #0 Foam::error::printStack(Foam::Ostream&)[180] #0 Foam::error::printStack(Foam::Ostream& )[35] #0 Foam::error::printStack(Foam::Ostream&)[163] #0 Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)[84] #0 Foam::error::printStack(Foam::Ostream&)[139] #0 Foam::er ror::printStack(Foam::Ostream&)[164] #0 Foam::error::printStack(Foam::Ostream&)[36] #0 Foam::error::printStack(Foam::Ostream&)[87] #0 [37] #0 Foam::error::printStack(Foam::Ostream&)Foam::error::print Stack(Foam::Ostream&)[c21b03:29069] Process received signal 52 [38] #0 [92] #0 [c21b03:29069] Signal: Segmentation fault (11) 53 [c21b03:29069] Signal code: Address not mapped (1) 54 [c21b03:29069] Failing at address: 0xf1f6608 55 [17] [39] #0 Foam::error::printStack(Foam::Ostream&)[95] #0 #0 Foam::error::printStack(Foam::Ostream&)[44] #0 Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)[148] #0 F oam::error::printStack(Foam::Ostream&)[47] #0 Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam::Ostream&)[27] #0 Foam::error::printStack(Foam::Ostream&)Foam::error::printStack(Foam:: Ostream&)[26] #0 Foam::error::printStack(Foam::Ostream&)[43] #0 Foam::error::printStack(Foam::Ostream&)[34] #0 Foam::error::printStack(Foam::Ostream&)[19] #0 Foam::error::printStack(Foam::Ostream&)[1 71] #0 Foam::error::printStack(Foam::Ostream&)[91] #0 Foam::error::printStack(Foam::Ostream&)[18] #0 Foam::error::printStack(Foam::Ostream&)[82] #0 [83] #0 Foam::error::printStack(Foam::Ostream&)Foa m::error::printStack(Foam::Ostream&)[25] #0 Foam::error::printStack(Foam::Ostream&)[9] #0 Foam::error::printStack(Foam::Ostream&)[2] #0 Foam::error::printStack(Foam::Ostream&)[3] #0 Foam::error::prin tStack(Foam::Ostream&)[10] #0 Foam::error::printStack(Foam::Ostream&)[75] #0 Foam::error::printStack(Foam::Ostream&)[179] #0 Foam::error::printStack(Foam::Ostream&)[115] #0 Foam::error::printStack(Fo am::Ostream&)[187] #0 Foam::error::printStack(Foam::Ostream&)[186] #0 Foam::error::printStack(Foam::Ostream&)[42] #0 [c21b03:29069] [ 0] /lib64/libc.so.6(+0x35670) [0x2b9b55c03670] 56 [c21b03:29069] [ 1] /lib64/libc.so.6(libc_fork+0x128) [0x2b9b55c8b578] 57 [c21b03:29069] [ 2] /lib64/libc.so.6(_IO_proc_open+0xbc) [0x2b9b55c3af9c] 58 [c21b03:29069] [ 3] /lib64/libc.so.6(popen+0x5c) [0x2b9b55c3b22c] 59 [c21b03:29069] [ 4] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam5pOpenERKNS_6stringEi+0x38) [0x2b9b54d6b378] 60 [c21b03:29069] [ 5] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam22printSourceFileAndLineERNS_7OstreamERKNS_8fileNameEP7Dl_infoPv+0x162) [0x2b9b54d6b62 2] 61 [c21b03:29069] [ 6] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam5error10printStackERNS_7OstreamE+0xc2) [0x2b9b54d6d142] 62 [c21b03:29069] [ 7] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam7sigSegv10sigHandlerEi+0x30) [0x2b9b54d67f50] 63 [c21b03:29069] [ 8] /lib64/libc.so.6(+0x35670) [0x2b9b55c03670] 64 [c21b03:29069] [ 9] /lib64/libc.so.6(__libc_fork+0x128) [0x2b9b55c8b578] 65 [c21b03:29069] [10] /lib64/libc.so.6(_IO_proc_open+0xbc) [0x2b9b55c3af9c] 66 [c21b03:29069] [11] /lib64/libc.so.6(popen+0x5c) [0x2b9b55c3b22c] 67 [c21b03:29069] [12] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam5pOpenERKNS_6stringEi+0x38) [0x2b9b54d6b378] 68 [c21b03:29069] [13] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam22printSourceFileAndLineERNS_7OstreamERKNS_8fileNameEP7Dl_infoPv+0x162) [0x2b9b54d6b62 2] 69 [c21b03:29069] [14] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam5error10printStackERNS_7OstreamE+0xc2) [0x2b9b54d6d142] [c21b03:29066] [16] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam5error10printStackERNS_7OstreamE+0xc2) [0x2b9b54d6d142] 3241 [c21b03:29066] [17] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam6sigFpe10sigHandlerEi+0x30) [0x2b9b54d67660] 3242 [c21b03:29066] [18] /lib64/libc.so.6(+0x35670) [0x2b9b55c03670] 3243 [c21b03:29066] [19] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam4sqrtERNS_5FieldIdEERKNS_5UListIdEE+0x20) [0x2b9b54c8b740] 3244 [c21b03:29066] [20] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libincompressibleTurbulenceModels.so(_ZN4Foam4sqrtINS_12fvPatchFieldENS_7volMeshEEENS_3tmpINS_14GeometricFiel dIdT_T0EEEERKS7+0x16c) [0x2b9b4ff4de6c] 3245 [c21b03:29066] [21] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libincompressibleTurbulenceModels.so(_ZNK4Foam9LESModels16LESeddyViscosityINS_29IncompressibleTurbulenceModel INS_14transportModelEEEE7epsilonEv+0x104) [0x2b9b4ff62914] 3246 [c21b03:29066] [22] pimpleTKEBudgetFoam() [0x42715a] 3247 [c21b03:29066] [23] /lib64/libc.so.6(libc_start_main+0xf5) [0x2b9b55befb15] 3248 [c21b03:29066] [24] pimpleTKEBudgetFoam() [0x428ebd] 3249 [c21b03:29066] End of error message 3250 addr2line failed 3251 [103] #1 Foam::sigFpe::sigHandler(int)#0 [c21b03:29320] Process received signal 3252 [c21b03:29320] Signal: Segmentation fault (11) 3253 [c21b03:29320] Signal code: Address not mapped (1) 3254 [c21b03:29320] Failing at address: 0xf1f6690 3255 addr2line failed 3256 [103] #2 ? in /lib64/libc.so.6 3257 [103] #3 Foam::sqrt(Foam::Field&, Foam::UList const&) at ??:? 3258 [103] #4 Foam::tmp<Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh> > Foam::sqrt<Foam::fvPatchField, Foam::volMesh>(Foam::GeometricField<double, Foam::fvPatchField, Foam::volMesh> const&) at ??:? 3259 [103] #5 Foam::LESModels::LESeddyViscosity<Foam::IncompressibleTurbulenceModel >::epsilon() const at ??:? 3260 [103] #6 ? at ??:? 3261 [103] #7 libc_start_main in /lib64/libc.so.6 3262 [103] #8 ? at ??:? 3263 [c21b03:28416] Process received signal 3264 [c21b03:28416] Signal: Floating point exception (8) 3265 [c21b03:28416] Signal code: (-6) 3266 [c21b03:28416] Failing at address: 0xbba00006f00 3267 [c21b03:28416] [ 0] /lib64/libc.so.6(+0x35670) [0x2b9b55c03670] 3268 [c21b03:28416] [ 1] /lib64/libc.so.6(gsignal+0x37) [0x2b9b55c035f7] 3269 [c21b03:28416] [ 2] /lib64/libc.so.6(+0x35670) [0x2b9b55c03670] 3270 [c21b03:28416] [ 3] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZN4Foam4sqrtERNS_5FieldIdEERKNS_5UListIdEE+0x20) [0x2b9b54c8b740] 3271 [c21b03:28416] [ 4] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libincompressibleTurbulenceModels.so(_ZN4Foam4sqrtINS_12fvPatchFieldENS_7volMeshEEENS_3tmpINS_14GeometricFiel dIdT_T0EEEERKS7+0x16c) [0x2b9b4ff4de6c] 3272 [c21b03:28416] [ 5] /home/wanggang/OpenFOAM/OpenFOAM-v1906/platforms/linux64GccDPInt32Opt/lib/libincompressibleTurbulenceModels.so(_ZNK4Foam9LESModels16LESeddyViscosityINS_29IncompressibleTurbulenceModel INS_14transportModelEEEE7epsilonEv+0x104) [0x2b9b4ff62914] 3273 [c21b03:28416] [ 6] pimpleTKEBudgetFoam() [0x42715a] 3274 [c21b03:28416] [ 7] /lib64/libc.so.6(libc_start_main+0xf5) [0x2b9b55befb15] 3275 [c21b03:28416] [ 8] pimpleTKEBudgetFoam() [0x428ebd] 3276 [c21b03:28416] End of error message

AndreaDesan commented 3 years ago

Not exactly sure what this is due to. As this solver is based on the existing pimpleFoam implementation I would suggest you do the following:

  1. Create a copy of pimpleFoam from your OpenFOAM release and rename it to pimpleTKEBudgetFoam (or any other convenient name) - check if this works
  2. Modify the copied solver according to what I have in this repository: this should entail modify createFields.H, include the tkeBudget.H file that you can find in this repository and #include tkeBudget.H in the .C file outisde the PIMPLE loop.
  3. Compile the modified solver and test it

Good luck! Andrea

gangw0632 commented 3 years ago

Thanks! I would have a try, and BTW, which OpenFOAM.org version are you testing this script?

Best, Gang

AndreaDesan commented 3 years ago

This worked for me in with both OpenFOAM 6 and OpenFOAM 7. Andrea