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AndrewCRMartin / absplit

Code to split an antibody PDB file into Fv fragments with their antigens
GNU General Public License v3.0
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4nzt shouldn't be flagged as a complex #11

Closed AndrewCRMartin closed 1 year ago

AndrewCRMartin commented 2 years ago

4nzt shouldn't be flagged as a complex - it's an antibody binding protein

AndrewCRMartin commented 1 year ago

Chain M is an antibody binding protein interacting with L and H - on the side of the Fv.

Needs the requirements for flagging an antigen to be tweaked - this isn't making enough contacts.

AndrewCRMartin commented 1 year ago

Check the number of FW contacts and the number of CDR contacts - require CDR contacts to be a majority

AndrewCRMartin commented 1 year ago

Fixed in 0d9a5e100ffaa8a212577f5a351b71d2a6153a2a