Re-add MD-TASK, apply clustering with K-means on the correlation matrix

AndrewRadev / protein-runway

Integrated Bioinformatics Project

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Re-add MD-TASK, apply clustering with K-means on the correlation matrix #54

Open AndrewRadev opened 2 days ago

AndrewRadev commented 2 days ago

The atomic movement similarity matrix from GeoStaS doesn't actually seem to produce great segmentation results. We should try the full one using MD-TASK + scipy clustering.