search

AndyWangON / Brain-tumor-segmentation-using-deep-learning

#BRATS2015 #BRATS2018 #deep learning #fully automatic brain tumor segmentation #U-net # tensorflow #Keras
54 stars 29 forks source link

Missing file #1

Closed Vigneshsab closed 6 years ago

Vigneshsab commented 6 years ago

Hey, could you please send the files which are mentioned in the below code

%%

catch all T1c.mha

create_data('/home/andy/Brain_tumor/BRATS2015/BRATS2015_Training/HGG/', '/Flair.mha', label=False, resize=(155,img_size,img_size)) create_data('/home/andy/Brain_tumor/BRATS2015/BRATS2015_Training/HGG/', '/OT.mha', label=True, resize=(155,img_size,img_size))

%%

catch BRATS2017 Data

create_data('/home/andy/Brain_tumor/BRATS2017/Pre-operative_TCGA_GBM_NIfTI_and_Segmentations/', '*/_flair.nii.gz', label=False, resize=(155,img_size,img_size)) create_data('/home/andy/Brain_tumor/BRATS2017/Pre-operative_TCGA_GBM_NIfTI_and_Segmentations/', '*/_GlistrBoost_ManuallyCorrected.nii.gz', label=True, resize=(155,img_size,img_size))

%%

load numpy array data

x = np.load('/home/andy/x_{}.npy'.format(imgsize)) y = np.load('/home/andy/y{}.npy'.format(img_size))

AndyWangON commented 6 years ago

You can Download it at here https://www.smir.ch/BRATS/Start2015