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AngryMaciek
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warlock
Warlock is a snakemake workflow to spawn multiple demons (deme-based oncology models) as jobs running around on a cluster environment 😈😈
https://github.com/AngryMaciek/warlock
Apache License 2.0
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chore: check compilation issues
#7
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AngryMaciek
closed
2 years ago
AngryMaciek
commented
2 years ago
add Anaconda compilers?
check env boost
AngryMaciek
commented
2 years ago
To begin with: compilation is not required inside the workflow. Compile once, after cloning, execute workflow later.
Inside the workflow we should have the binary as
input
for one rule. If the user did not compile the workflow will not run.
Compilation is platform specific: therefore compilers too! Anaconda compilers as well...
How to link the conda boost during the compilation?
All that described in the README: clone, create env, compile, run test.
AngryMaciek
commented
2 years ago
README
command to clone
command to create env
command to compile (if system-linux: install anaconda compiler linux else macos)
command to run the pipeline on a prepared test config.