Open zoekitchel opened 3 months ago
This issue was created in step where duplicate observations were removed (line 189 in ai_clean.R). I didn't realize that the output of sum(c(NA,NA,NA,NA,NA,NA,NA), na.rm = T) is 0, and not NA.
I have updated the code, files in FishGlob_data/outputs/Cleaned_data (SURVEY_data.Rdata) and cleaned google drive files (SURVEY_data.csv).
Unfortunately, the standardization code for the NEUS would never run fully for me after multiple attempts, so the neus_std_clean.Rdata file in the repository has NOT yet been updated. This still needs to be done.
is NEUS the only code that needs an update? I can try next week
Some surveys have values or 0s for num when they should have NA (aka no data exist, not that 0 were found).
Specifically: