Arcadia-Science / 2023-amblyomma-americanum-txome-assembly

MIT License
0 stars 0 forks source link

rules for adding in isoseq data #6

Closed taylorreiter closed 12 months ago

taylorreiter commented 1 year ago

I added this into the snakefile directly, but when isoseq data is uploaded to the SRA as a fastq file, it only needs to be converted to a fasta file before it can be treated as the best set of transcripts that can be derived from the raw seq data. so this is a super small PR to be able to add the isoseq data into the final transcriptome.