Arcadia-Science / noveltree

NovelTree is a highly parallelized and computationally efficient phylogenomic workflow that infers gene families, gene family trees, species trees, and gene family evolutionary history.
GNU Affero General Public License v3.0
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separated iqtree and iqtree_pmsf, made run of iqtree_pmsf conditional on param spec #62

Closed austinhpatton closed 1 year ago

austinhpatton commented 1 year ago

Related to what we discussed. IQTREE and IQTREE_PMSF are now each their own modules. IQTREE_PMSF only runs if params.tree_model_pmsf != 'none' (this is the default specified in the schema file).