Closed taylorreiter closed 7 months ago
update: I tried conodictor and encountered this issue https://github.com/koualab/conodictor/issues/18
With an update to conodictor, I was able to get it to run. However, reading the paper, the authors suggest that it is written to be very sensitive and specific to conopeptides, and not peptides from other venomous species. Given this, I think this tools is not worth including in the pipeline.
(it was also fairly buggy which would make it difficult to support)
After discussing with Adair, we both agree it doesn't make sense to include this tool at this time.
Description of feature
This paper has a section on RiPPs in animals. The only thing included was conopeptides:
It could be interesting to include conopeptide prediction in this pipeline.
Some tools that could accomplish this: